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Microbiology

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Molecular Testing

See here for Genital Culture / Cerebrospinal Fluid (CSF) molecular testing.

Investigations

Adenovirus PCR (Quantitative)

  • Specimen type: whole blood
  • Volume assay: 4ml
  • Frequency: weekly

HSV / VZV / Adenovirus / Chlamydia (vesicles, eyes)

  • Specimen type: swab in universal transport medium (red or green top)
  • Volume assay: N/A
  • Frequency: weekly

On EPR: VZV / HSV PCR, vesicle swab or VZV / HSV / Adeno / Chlamydia PCR, non-genital swab (eyes)

HSV (genital swabs)

  • Swabs of lesions from the anogenital region in red or green top UTM
  • Volume: N/A
  • Frequency: 2-3 times a week

On EPR: HSV PCR, genital sample

Cytomegalovirus (CMV) viral load PCR

(Not UKAS accredited)

  • Specimen type: whole blood / urine
  • Volume assay: 4ml
  • Frequency: twice weekly

Urine for the diagnosis of congenital CMV only

Epstein Barr virus (EBV) viral load PCR

(Not UKAS accredited)

  • Specimen type: whole blood
  • Volume assay: 4ml
  • Frequency: twice weekly

BK virus (BKV) viral load PCR

  • Specimen type: plasma / serum
  • Volume assay: 4ml
  • Frequency: at least twice per week

Hepatitis C (HCV) RNA viral load PCR

  • Specimen type: plasma / serum
  • Volume assay: 10ml
  • Frequency: daily Monday to Friday

On EPR contained in Hepatitis B or C positive CareSet

Hepatitis B (HBV) DNA viral load PCR

  • Specimen type: plasma / serum
  • Volume assay: 10ml
  • Frequency: daily Monday to Friday

On EPR contained in Hepatitis B or C positive CareSet

HIV viral load PCR

  • Specimen type: plasma
  • Volume assay: 10ml
  • Frequency: daily Monday to Friday

On EPR contained in Specialist HIV CareSet

Parvovirus PCR

  • Specimen type: whole blood
  • Volume assay: 4ml
  • Frequency: weekly

Please discuss with Microbiology medical staff.

Mpox PCR

(Not UKAS accredited)

  • Specimen type: swab in universal transport medium (red or green top)
  • Volume assay: N/A
  • Frequency: next available run Monday to Friday

Mycoplasma Genitalium

(Not UKAS accredited)

  • Specimen type: urine / genital swab in UTM
  • Volume assay: urine 8ml minimum
  • Frequency: daily Monday to Friday

Hepatitis E PCR

  • Specimen type: plasma / serum
  • Volume assay: 4ml
  • Frequency: weekly

Last reviewed:03 December 2024